A. carolinensis Gene: CALCOCO2 - ENSACAG00000006352 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000006352
NameCALCOCO2
Descriptioncalcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
OrganismAnolis carolinensis (green anole)
Synonym(s)mgc17318, ndp52
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
784
  • 784
  • 857
96.11
  • 96.11
  • 95.75
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.36e3
  • 1.36e3
  • 3.30e3
93.24
  • 93.24
  • 83.63
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.77e3
  • 1.77e3
91.21
  • 91.21
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.44e3
  • 2.44e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.08e3
  • 3.08e3
84.70
  • 84.70
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.61e3
  • 5.61e3
  • 8.21e3
72.15
  • 72.15
  • 59.23
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.51e3
  • 6.51e3
67.70
  • 67.70
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.37e3
  • 7.37e3
63.43
  • 63.43
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.51e3
  • 7.51e3
62.74
  • 62.74
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.71e3
  • 7.71e3
61.74
  • 61.74
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.11e3
  • 8.11e3
59.76
  • 59.76
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.46e3
  • 8.46e3
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.50e3
  • 9.50e3
52.84
  • 52.84
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.00e4
  • 1.00e4
50.15
  • 50.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSACAG00000006352.

Cross-references

EnsemblENSACAG00000006352 (CALCOCO2)
HGNCHGNC:29912 (CALCOCO2)
Uniprot/SPTREMBLG1KFA4, G1KFA4_ANOCA, G1KYF2, G1KYF2_ANOCA

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