A. carolinensis Gene: ITGB1 - ENSACAG00000006788 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000006788
NameITGB1
Descriptionintegrin subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:6153]
OrganismAnolis carolinensis (green anole)
Synonym(s)cd29, fnrb, gpiia, mdf2, msk12
Orthologs(s)26 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
853
  • 853
95.77
  • 95.77
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.11e3
  • 1.11e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.30e3
  • 1.30e3
  • 1.66e3
93.55
  • 93.55
  • 91.77
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.35e3
  • 1.35e3
93.29
  • 93.29
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.54e3
  • 1.54e3
92.34
  • 92.34
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.87e3
  • 1.87e3
90.73
  • 90.73
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.33e3
  • 2.33e3
88.42
  • 88.42
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.36e3
  • 2.36e3
88.29
  • 88.29
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.82e3
  • 2.82e3
  • 3.46e3
85.99
  • 85.99
  • 82.81
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.49e3
  • 3.49e3
82.67
  • 82.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.16e3
  • 5.16e3
74.37
  • 74.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.29e3
  • 5.29e3
  • 6.50e3
73.74
  • 73.74
  • 67.74
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.45e3
  • 5.45e3
72.94
  • 72.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.12e3
  • 6.12e3
69.60
  • 69.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSACAG00000006788.

Paralogs (same species)

Cross-references

EnsemblENSACAG00000006788 (ITGB1)
HGNCHGNC:6153 (ITGB1)
Uniprot/SPTREMBLG1KFZ8, G1KFZ8_ANOCA

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