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A. carolinensis Gene: SMC4 - ENSACAG00000007074 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000007074
NameSMC4
Descriptionstructural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]
OrganismAnolis carolinensis (green anole)
Synonym(s)cap-c, hcap-c, smc4l1
Orthologs(s)28 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
209
  • 209
  • 855
98.96
  • 98.96
  • 95.76
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
275
  • 275
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
295
  • 295
98.54
  • 98.54
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
393
  • 393
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
668
  • 668
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
922
  • 922
95.43
  • 95.43
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.07e3
  • 1.07e3
94.67
  • 94.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.48e3
  • 1.48e3
92.68
  • 92.68
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.22e3
  • 3.22e3
84.04
  • 84.04
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.56e3
  • 4.56e3
  • 7.54e3
77.35
  • 77.35
  • 62.59
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.05e3
  • 5.05e3
74.93
  • 74.93
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.48e3
  • 5.48e3
  • 9.09e3
72.78
  • 72.78
  • 54.86
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.81e3
  • 7.81e3
61.23
  • 61.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.29e3
  • 8.29e3
  • 1.04e4
58.82
  • 58.82
  • 48.60
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.28e4
  • 1.28e4
36.36
  • 36.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species18 genesCompare expression
Tetrapoda18 species19 genesCompare expression
Euteleostomi19 species20 genesCompare expression
Bilateria26 species28 genesCompare expression

Orthology information comes from OMA : ENSACAG00000007074.

Cross-references

EnsemblENSACAG00000007074 (SMC4)
HGNCHGNC:14013 (SMC4)
Uniprot/SPTREMBLG1KG91, G1KG91_ANOCA

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