Gene: PBRM1 - ENSACAG00000007132 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000007132
Name	PBRM1
Description	polybromo 1 [Source:HGNC Symbol;Acc:HGNC:30064]
Organism	Anolis carolinensis (green anole)
Synonym(s)	baf180, pb1
Orthologs(s)	24 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	791 791	96.08 96.08	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	867 867	95.70 95.70	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.19e3 1.19e3	94.11 94.11	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	1.37e3 1.37e3	93.19 93.19	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.90e3 1.90e3	90.57 90.57	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	2.46e3 2.46e3	87.77 87.77	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	3.90e3 3.90e3 4.73e3	80.64 80.64 76.52	AEIR AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	4.34e3 4.34e3	78.48 78.48	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	4.66e3 4.66e3 7.48e3	76.87 76.87 62.86	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	4.75e3 4.75e3	76.44 76.44	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	4.85e3 4.85e3	75.94 75.94	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	5.38e3 5.38e3	73.32 73.32	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	5.66e3 5.66e3	71.91 71.91	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.21e3 7.21e3 8.74e3	64.19 64.19 56.61	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000001590 PBRM1	Compare expression	[+]
Amniota	15 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken)	15 genes ENSG00000163939 PBRM1 ENSMUSG00000042323 Pbrm1 ENSPTRG00000015007 PBRM1 ENSGGOG00000016002 PBRM1 ENSMMUG00000017361 PBRM1 ENSRNOG00000028227 Pbrm1 ENSBTAG00000014786 PBRM1 ENSECAG00000000555 PBRM1 ENSOCUG00000009829 PBRM1 ENSCAFG00000009084 PBRM1 ENSFCAG00000015718 PBRM1 ENSCPOG00000000280 PBRM1 ENSEEUG00000015534 PBRM1 ENSMODG00000011318 PBRM1 ENSGALG00000001590 PBRM1	Compare expression	[+]
Tetrapoda	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000163939 PBRM1 ENSMUSG00000042323 Pbrm1 ENSPTRG00000015007 PBRM1 ENSGGOG00000016002 PBRM1 ENSMMUG00000017361 PBRM1 ENSRNOG00000028227 Pbrm1 ENSBTAG00000014786 PBRM1 ENSECAG00000000555 PBRM1 ENSOCUG00000009829 PBRM1 ENSCAFG00000009084 PBRM1 ENSFCAG00000015718 PBRM1 ENSCPOG00000000280 PBRM1 ENSEEUG00000015534 PBRM1 ENSMODG00000011318 PBRM1 ENSGALG00000001590 PBRM1 ENSXETG00000013671 pbrm1	Compare expression	[+]
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000163939 PBRM1 ENSMUSG00000042323 Pbrm1 ENSDARG00000003877 pbrm1 ENSPTRG00000015007 PBRM1 ENSGGOG00000016002 PBRM1 ENSMMUG00000017361 PBRM1 ENSRNOG00000028227 Pbrm1 ENSBTAG00000014786 PBRM1 ENSECAG00000000555 PBRM1 ENSOCUG00000009829 PBRM1 ENSCAFG00000009084 PBRM1 ENSFCAG00000015718 PBRM1 ENSCPOG00000000280 PBRM1 ENSEEUG00000015534 PBRM1 ENSMODG00000011318 PBRM1 ENSGALG00000001590 PBRM1 ENSXETG00000013671 pbrm1	Compare expression	[+]
Bilateria	24 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Drosophila melanogaster (fruit fly) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	24 genes ENSG00000163939 PBRM1 ENSMUSG00000042323 Pbrm1 ENSDARG00000003877 pbrm1 FBgn0039227 polybromo WBGene00007042 pbrm-1 ENSPTRG00000015007 PBRM1 ENSGGOG00000016002 PBRM1 ENSMMUG00000017361 PBRM1 ENSRNOG00000028227 Pbrm1 ENSBTAG00000014786 PBRM1 ENSECAG00000000555 PBRM1 ENSOCUG00000009829 PBRM1 ENSCAFG00000009084 PBRM1 ENSFCAG00000015718 PBRM1 ENSCPOG00000000280 PBRM1 ENSEEUG00000015534 PBRM1 ENSMODG00000011318 PBRM1 ENSGALG00000001590 PBRM1 ENSXETG00000013671 pbrm1 FBgn0100174 GF23180 FBgn0146764 GI24041 FBgn0189803 GD18270 FBgn0210767 GJ23670 FBgn0228617 GE10775	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000007132.

Cross-references

Ensembl	ENSACAG00000007132 (PBRM1)
HGNC	HGNC:30064 (PBRM1)
Uniprot/SPTREMBL	G1KGF8, G1KGF8_ANOCA