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A. carolinensis Gene: LGI1 - ENSACAG00000007345 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000007345
NameLGI1
Descriptionleucine-rich, glioma inactivated 1 [Source:HGNC Symbol;Acc:HGNC:6572]
OrganismAnolis carolinensis (green anole)
Synonym(s)epitempin, ept, etl1, ib1099
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.52e3
  • 1.52e3
  • 1.21e4
92.46
  • 92.46
  • 40.15
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.14e3
  • 7.14e3
64.54
  • 64.54
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.12e3
  • 9.12e3
  • 1.08e4
54.72
  • 54.72
  • 46.44
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.52e3
  • 9.52e3
  • 9.86e3
52.73
  • 52.73
  • 51.04
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.15e4
  • 1.15e4
43.15
  • 43.15
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.20e4
  • 1.20e4
40.33
  • 40.33
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.27e4
  • 1.27e4
36.77
  • 36.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000007345.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000007345.

Cross-references

EnsemblENSACAG00000007345 (LGI1)
HGNCHGNC:6572 (LGI1)
Uniprot/SPTREMBLH9GCL4, H9GCL4_ANOCA

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