A. carolinensis Gene: SMARCB1 - ENSACAG00000007478 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000007478
NameSMARCB1
DescriptionSWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:HGNC Symbol;Acc:HGNC:11103]
OrganismAnolis carolinensis (green anole)
Synonym(s)baf47, hsnfs, ini1, ppp1r144, rdt, sfh1p, snf5l1, snr1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.57e3
  • 3.57e3
82.30
  • 82.30
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
4.36e3
  • 4.36e3
  • 1.35e4
78.35
  • 78.35
  • 33.08
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.83e3
  • 4.83e3
  • 9.87e3
76.03
  • 76.03
  • 50.98
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.23e3
  • 5.23e3
  • 8.34e3
74.02
  • 74.02
  • 58.57
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.98e3
  • 6.98e3
65.35
  • 65.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.69e3
  • 7.69e3
61.80
  • 61.80
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.88e3
  • 7.88e3
60.88
  • 60.88
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
8.06e3
  • 8.06e3
59.99
  • 59.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.75e3
  • 8.75e3
  • 1.20e4
56.54
  • 56.54
  • 40.64
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.10e3
  • 9.10e3
54.81
  • 54.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.24e3
  • 9.24e3
54.15
  • 54.15
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
49.54
  • 49.54
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.02e4
  • 1.02e4
49.51
  • 49.51
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
47.95
  • 47.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000007478 (SMARCB1)
HGNCHGNC:11103 (SMARCB1)
Uniprot/SPTREMBLH9GCQ8, H9GCQ8_ANOCA

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