A. carolinensis Gene: LRRTM1 - ENSACAG00000007791 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000007791
NameLRRTM1
Descriptionleucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj32082

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.92e3
  • 1.92e3
  • 8.41e3
90.48
  • 90.48
  • 58.23
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.62e3
  • 3.62e3
82.02
  • 82.02
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.30e3
  • 9.30e3
53.84
  • 53.84
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
47.72
  • 47.72
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.46e4
36.03
  • 36.03
  • 27.31
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
1.41e4
  • 1.41e4
30.18
  • 30.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.42e4
  • 1.42e4
29.35
  • 29.35
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.45e4
  • 1.45e4
27.85
  • 27.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000007791 (LRRTM1)
HGNCHGNC:19408 (LRRTM1)
Uniprot/SPTREMBLG1KH17, G1KH17_ANOCA

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