A. carolinensis Gene: FMR1 - ENSACAG00000007899 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000007899
NameFMR1
Descriptionfragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
OrganismAnolis carolinensis (green anole)
Synonym(s)fmrp, fraxa, mgc87458, pof, pof1
Orthologs(s)18 orthologs
Paralog(s)289 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
602
  • 602
97.02
  • 97.02
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
677
  • 677
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.00e3
  • 1.00e3
95.03
  • 95.03
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.05e3
  • 1.05e3
94.80
  • 94.80
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.12e3
  • 1.12e3
  • 1.33e3
94.46
  • 94.46
  • 93.42
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.17e3
  • 1.17e3
  • 1.59e3
94.22
  • 94.22
  • 92.11
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.25e3
  • 1.25e3
93.80
  • 93.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.27e3
  • 1.27e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.28e3
  • 1.28e3
93.64
  • 93.64
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.34e3
  • 1.34e3
93.38
  • 93.38
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.41e3
  • 1.41e3
93.01
  • 93.01
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.47e3
  • 1.47e3
  • 1.71e3
92.70
  • 92.70
  • 91.52
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.65e3
  • 1.65e3
91.80
  • 91.80
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
2.19e3
  • 2.19e3
89.14
  • 89.14
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000007899.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Metazoa1 geneCompare expression
Eukaryota289 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000007899.

Cross-references

EnsemblENSACAG00000007899 (FMR1)
HGNCHGNC:3775 (FMR1)
Uniprot/SPTREMBLH9GDA8, H9GDA8_ANOCA

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