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A. carolinensis Gene: SF3B5 - ENSACAG00000007948 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000007948
NameSF3B5
Descriptionsplicing factor 3b subunit 5 [Source:HGNC Symbol;Acc:HGNC:21083]
OrganismAnolis carolinensis (green anole)
Synonym(s)mgc3133, sf3b10, ysf3
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
110
  • 110
99.46
  • 99.46
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
132
  • 132
  • 4.48e3
99.35
  • 99.35
  • 77.77
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
200
  • 200
99.01
  • 99.01
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
275
  • 275
98.64
  • 98.64
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
323
  • 323
  • 411
98.40
  • 98.40
  • 97.96
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
338
  • 338
98.33
  • 98.33
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
341
  • 341
98.31
  • 98.31
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
383
  • 383
98.10
  • 98.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
442
  • 442
  • 569
97.81
  • 97.81
  • 97.18
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
511
  • 511
97.47
  • 97.47
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
688
  • 688
96.59
  • 96.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
729
  • 729
  • 3.73e3
96.39
  • 96.39
  • 81.48
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.12e3
  • 2.12e3
89.50
  • 89.50
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.42e3
  • 4.42e3
78.08
  • 78.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSACAG00000007948.

Cross-references

EnsemblENSACAG00000007948 (SF3B5)
HGNCHGNC:21083 (SF3B5)
Uniprot/SPTREMBLG1KH75, G1KH75_ANOCA

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