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A. carolinensis Gene: APEX1 - ENSACAG00000008099 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000008099
NameAPEX1
DescriptionAPEX nuclease (multifunctional DNA repair enzyme) 1 [Source:HGNC Symbol;Acc:HGNC:587]
OrganismAnolis carolinensis (green anole)
Synonym(s)ape, ape-1, apen, apex, apx, hap1, ref-1, ref1
Orthologs(s)17 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.38e3
  • 2.38e3
88.17
  • 88.17
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.70e3
  • 2.70e3
86.60
  • 86.60
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.95e3
  • 2.95e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.33e3
  • 3.33e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.93e3
  • 4.93e3
  • 4.98e3
75.52
  • 75.52
  • 75.29
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.44e3
  • 5.44e3
  • 8.24e3
73.00
  • 73.00
  • 59.11
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.12e3
  • 6.12e3
69.60
  • 69.60
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
6.88e3
  • 6.88e3
65.84
  • 65.84
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.07e3
  • 7.07e3
64.90
  • 64.90
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.09e3
  • 7.09e3
64.83
  • 64.83
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
7.50e3
  • 7.50e3
  • 8.09e3
62.76
  • 62.76
  • 59.84
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.84e3
  • 7.84e3
61.07
  • 61.07
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.78e3
  • 9.78e3
51.43
  • 51.43
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.17e4
  • 1.17e4
41.86
  • 41.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria17 species17 genesCompare expression

Orthology information comes from OMA : ENSACAG00000008099.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000008099.

Cross-references

EnsemblENSACAG00000008099 (APEX1)
HGNCHGNC:587 (APEX1)
Uniprot/SPTREMBLH9GDG2, H9GDG2_ANOCA

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