Gene: SGMS2 - ENSACAG00000008243 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000008243
Name	SGMS2
Description	sphingomyelin synthase 2 [Source:HGNC Symbol;Acc:HGNC:28395]
Organism	Anolis carolinensis (green anole)
Synonym(s)	mgc26963, sms2
Orthologs(s)	18 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	1.66e3 1.66e3	91.77 91.77	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	2.35e3 2.35e3	88.35 88.35	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	4.33e3 4.33e3	78.51 78.51	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	5.93e3 5.93e3	70.54 70.54	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	6.04e3 6.04e3 9.49e3	70.00 70.00 52.87	AEIR AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	6.09e3 6.09e3 1.05e4	69.77 69.77 47.86	AEIR AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	7.20e3 7.20e3	64.23 64.23	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	7.83e3 7.83e3 1.10e4	61.13 61.13 45.23	AEIR AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	9.30e3 9.30e3	53.83 53.83	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	9.85e3 9.85e3	51.10 51.10	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.02e4 1.02e4	49.49 49.49	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	1.16e4 1.16e4	42.19 42.19	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.25e4 1.25e4	38.02 38.02	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000010535 SGMS2	Compare expression	[+]
Amniota	16 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	16 genes ENSG00000164023 SGMS2 ENSMUSG00000050931 Sgms2 ENSGGOG00000012598 SGMS2 ENSMMUG00000017834 SGMS2 ENSRNOG00000011284 Sgms2 ENSBTAG00000016805 SGMS2 ENSSSCG00000009152 SGMS2 ENSECAG00000021665 SGMS2 ENSOCUG00000009998 SGMS2 ENSCAFG00000011200 SGMS2 ENSFCAG00000012289 SGMS2 ENSCPOG00000011744 SGMS2 ENSEEUG00000009293 SGMS2 ENSMODG00000020609 SGMS2 ENSOANG00000007747 SGMS2 ENSGALG00000010535 SGMS2	Compare expression	[+]
Tetrapoda	17 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000164023 SGMS2 ENSMUSG00000050931 Sgms2 ENSGGOG00000012598 SGMS2 ENSMMUG00000017834 SGMS2 ENSRNOG00000011284 Sgms2 ENSBTAG00000016805 SGMS2 ENSSSCG00000009152 SGMS2 ENSECAG00000021665 SGMS2 ENSOCUG00000009998 SGMS2 ENSCAFG00000011200 SGMS2 ENSFCAG00000012289 SGMS2 ENSCPOG00000011744 SGMS2 ENSEEUG00000009293 SGMS2 ENSMODG00000020609 SGMS2 ENSOANG00000007747 SGMS2 ENSGALG00000010535 SGMS2 ENSXETG00000019854 sgms2	Compare expression	[+]
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000164023 SGMS2 ENSMUSG00000050931 Sgms2 ENSDARG00000052520 sgms2 ENSGGOG00000012598 SGMS2 ENSMMUG00000017834 SGMS2 ENSRNOG00000011284 Sgms2 ENSBTAG00000016805 SGMS2 ENSSSCG00000009152 SGMS2 ENSECAG00000021665 SGMS2 ENSOCUG00000009998 SGMS2 ENSCAFG00000011200 SGMS2 ENSFCAG00000012289 SGMS2 ENSCPOG00000011744 SGMS2 ENSEEUG00000009293 SGMS2 ENSMODG00000020609 SGMS2 ENSOANG00000007747 SGMS2 ENSGALG00000010535 SGMS2 ENSXETG00000019854 sgms2	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000008243.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	1 gene ENSACAG00000015253 SGMS1	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000008243.

Cross-references

Ensembl	ENSACAG00000008243 (SGMS2)
HGNC	HGNC:28395 (SGMS2)
Uniprot/SPTREMBL	H9GDN8, H9GDN8_ANOCA