A. carolinensis Gene: LDB2 - ENSACAG00000008370 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000008370
NameLDB2
DescriptionLIM domain binding 2 [Source:HGNC Symbol;Acc:HGNC:6533]
OrganismAnolis carolinensis (green anole)
Synonym(s)clim1, ldb1
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.99e3
  • 1.99e3
90.10
  • 90.10
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.15e3
  • 2.15e3
89.35
  • 89.35
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.92e3
  • 2.92e3
85.49
  • 85.49
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
3.69e3
  • 3.69e3
81.67
  • 81.67
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.79e3
  • 5.79e3
  • 1.05e4
71.27
  • 71.27
  • 47.81
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.95e3
  • 5.95e3
70.47
  • 70.47
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.55e3
  • 7.55e3
62.52
  • 62.52
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
8.21e3
  • 8.21e3
59.27
  • 59.27
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
8.36e3
  • 8.36e3
58.52
  • 58.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.95e3
  • 8.95e3
  • 1.03e4
55.58
  • 55.58
  • 48.90
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.99e3
  • 8.99e3
55.36
  • 55.36
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.19e4
  • 1.19e4
  • 1.27e4
40.72
  • 40.72
  • 37.15
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000008370.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000008370.

Cross-references

EnsemblENSACAG00000008370 (LDB2)
HGNCHGNC:6533 (LDB2)
Uniprot/SPTREMBLH9GDU6, H9GDU6_ANOCA

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