A. carolinensis Gene: BRAT1 - ENSACAG00000008687 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000008687
NameBRAT1
DescriptionBRCA1-associated ATM activator 1 [Source:HGNC Symbol;Acc:HGNC:21701]
OrganismAnolis carolinensis (green anole)
Synonym(s)baat1, c7orf27, mgc22916
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.46e3
  • 2.46e3
87.79
  • 87.79
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.65e3
  • 3.65e3
81.87
  • 81.87
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.21e3
  • 4.21e3
  • 7.04e3
79.12
  • 79.12
  • 65.05
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.82e3
  • 5.82e3
71.10
  • 71.10
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.21e3
  • 6.21e3
  • 9.95e3
69.18
  • 69.18
  • 50.58
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.70e3
  • 7.70e3
  • 1.16e4
61.76
  • 61.76
  • 42.34
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
7.85e3
  • 7.85e3
61.01
  • 61.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.96e3
  • 7.96e3
60.46
  • 60.46
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
8.09e3
  • 8.09e3
59.81
  • 59.81
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
9.25e3
  • 9.25e3
  • 1.45e4
54.09
  • 54.09
  • 28.16
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
9.67e3
  • 9.67e3
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.06e4
  • 1.06e4
47.48
  • 47.48
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.06e4
  • 1.06e4
47.14
  • 47.14
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.14e4
  • 1.14e4
43.38
  • 43.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000008687.

Cross-references

EnsemblENSACAG00000008687 (BRAT1)
HGNCHGNC:21701 (BRAT1)
Uniprot/SPTREMBLH9GE83, H9GE83_ANOCA

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