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A. carolinensis Gene: CHMP4B - ENSACAG00000008891 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000008891
NameCHMP4B
Descriptioncharged multivesicular body protein 4B [Source:HGNC Symbol;Acc:HGNC:16171]
OrganismAnolis carolinensis (green anole)
Synonym(s)c20orf178, dj553f4.4, shax1, snf7-2, vps32b
Orthologs(s)29 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
389
  • 389
  • 771
98.07
  • 98.07
  • 96.18
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
505
  • 505
97.50
  • 97.50
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
535
  • 535
  • 827
97.35
  • 97.35
  • 95.90
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
572
  • 572
97.16
  • 97.16
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
603
  • 603
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
610
  • 610
  • 965
96.98
  • 96.98
  • 95.21
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
617
  • 617
96.94
  • 96.94
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
662
  • 662
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
671
  • 671
96.67
  • 96.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
771
  • 771
  • 919
96.18
  • 96.18
  • 95.44
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
882
  • 882
95.63
  • 95.63
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
906
  • 906
95.51
  • 95.51
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.32e3
  • 1.32e3
93.45
  • 93.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.48e3
  • 1.48e3
92.65
  • 92.65
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.68e3
  • 1.68e3
91.67
  • 91.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species20 genesCompare expression
Bilateria25 species29 genesCompare expression

Orthology information comes from OMA : ENSACAG00000008891.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Chordata2 genesCompare expression
Eukaryota3 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000008891.

Cross-references

EnsemblENSACAG00000008891 (CHMP4B)
HGNCHGNC:16171 (CHMP4B)
Uniprot/SPTREMBLG1KIA2, G1KIA2_ANOCA

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