A. carolinensis Gene: SEC61B - ENSACAG00000009059 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009059
NameSEC61B
DescriptionSec61 translocon beta subunit [Source:HGNC Symbol;Acc:HGNC:16993]
OrganismAnolis carolinensis (green anole)
Orthologs(s)25 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000104life cycle
46.0
  • 46.0
99.78
  • 99.78
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
49.8
  • 49.8
99.76
  • 99.76
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
81.0
  • 81.0
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
82.9
  • 82.9
  • 108
99.59
  • 99.59
  • 99.47
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
87.0
  • 87.0
99.57
  • 99.57
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
120
  • 120
99.41
  • 99.41
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
189
  • 189
  • 1.02e3
99.07
  • 99.07
  • 94.94
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
252
  • 252
  • 826
98.75
  • 98.75
  • 95.90
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
270
  • 270
  • 624
98.66
  • 98.66
  • 96.91
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
272
  • 272
98.65
  • 98.65
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
462
  • 462
97.71
  • 97.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
666
  • 666
96.70
  • 96.70
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
853
  • 853
95.77
  • 95.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
963
  • 963
95.22
  • 95.22
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.40e3
  • 1.40e3
93.05
  • 93.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species16 genesCompare expression
Tetrapoda15 species17 genesCompare expression
Euteleostomi16 species18 genesCompare expression
Bilateria23 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000009059.

Cross-references

EnsemblENSACAG00000009059 (SEC61B)
HGNCHGNC:16993 (SEC61B)
Uniprot/SPTREMBLG1KIE1, G1KIE1_ANOCA

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