Gene: USP28 - ENSACAG00000009092 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000009092
Name	USP28
Description	ubiquitin specific peptidase 28 [Source:HGNC Symbol;Acc:HGNC:12625]
Organism	Anolis carolinensis (green anole)
Synonym(s)	kiaa1515
Orthologs(s)	17 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	509 509 1.17e3	97.48 97.48 94.20	AEIR AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	911 911 2.31e3	95.48 95.48 88.53	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	3.20e3 3.20e3	84.11 84.11	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	3.81e3 3.81e3	81.09 81.09	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	7.28e3 7.28e3 9.28e3	63.85 63.85 53.94	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.01e3 8.01e3	60.25 60.25	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	8.75e3 8.75e3	56.58 56.58	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	9.63e3 9.63e3	52.20 52.20	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	1.03e4 1.03e4	48.77 48.77	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.05e4 1.05e4	47.86 47.86	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	1.06e4 1.06e4	47.52 47.52	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	1.08e4 1.08e4	46.62 46.62	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	1.10e4 1.10e4	45.19 45.19	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000006969 USP28	Compare expression	[+]
Amniota	15 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Gallus gallus (chicken)	15 genes ENSG00000048028 USP28 ENSMUSG00000032267 Usp28 ENSPTRG00000004299 USP28 ENSGGOG00000005119 USP28 ENSMMUG00000023773 USP28 ENSRNOG00000007325 Usp28 ENSBTAG00000002323 USP28 ENSSSCG00000015052 USP28 ENSECAG00000023344 USP28 ENSOCUG00000007441 USP28 ENSCAFG00000013688 USP28 ENSFCAG00000004976 USP28 ENSCPOG00000001875 USP28 ENSEEUG00000011745 USP28 ENSGALG00000006969 USP28	Compare expression	[+]
Tetrapoda	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000048028 USP28 ENSMUSG00000032267 Usp28 ENSPTRG00000004299 USP28 ENSGGOG00000005119 USP28 ENSMMUG00000023773 USP28 ENSRNOG00000007325 Usp28 ENSBTAG00000002323 USP28 ENSSSCG00000015052 USP28 ENSECAG00000023344 USP28 ENSOCUG00000007441 USP28 ENSCAFG00000013688 USP28 ENSFCAG00000004976 USP28 ENSCPOG00000001875 USP28 ENSEEUG00000011745 USP28 ENSGALG00000006969 USP28 ENSXETG00000022958 usp28	Compare expression	[+]
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000048028 USP28 ENSMUSG00000032267 Usp28 ENSDARG00000008880 usp28 ENSPTRG00000004299 USP28 ENSGGOG00000005119 USP28 ENSMMUG00000023773 USP28 ENSRNOG00000007325 Usp28 ENSBTAG00000002323 USP28 ENSSSCG00000015052 USP28 ENSECAG00000023344 USP28 ENSOCUG00000007441 USP28 ENSCAFG00000013688 USP28 ENSFCAG00000004976 USP28 ENSCPOG00000001875 USP28 ENSEEUG00000011745 USP28 ENSGALG00000006969 USP28 ENSXETG00000022958 usp28	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000009092.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Vertebrata	1 gene ENSACAG00000010500 USP25	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000009092.

Cross-references

Ensembl	ENSACAG00000009092 (USP28)
HGNC	HGNC:12625 (USP28)
Uniprot/SPTREMBL	H9GEW5, H9GEW5_ANOCA