Gene: BRD1 - ENSACAG00000009136 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000009136
Name	BRD1
Description	bromodomain containing 1 [Source:HGNC Symbol;Acc:HGNC:1102]
Organism	Anolis carolinensis (green anole)
Synonym(s)	brl, brpf2
Orthologs(s)	17 orthologs
Paralog(s)	2 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	3.35e3 3.35e3	83.39 83.39	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	3.43e3 3.43e3	82.97 82.97	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	4.67e3 4.67e3	76.79 76.79	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.97e3 4.97e3	75.34 75.34	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	5.57e3 5.57e3	72.34 72.34	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	5.76e3 5.76e3	71.38 71.38	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	6.09e3 6.09e3	69.76 69.76	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	6.89e3 6.89e3	65.81 65.81	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	7.19e3 7.19e3	64.30 64.30	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.37e3 7.37e3 8.41e3	63.40 63.40 58.27	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	8.14e3 8.14e3 8.16e3	59.56 59.56 59.49	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	8.37e3 8.37e3	58.45 58.45	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	9.32e3 9.32e3 9.32e3	53.74 53.74 53.73	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.70e3 9.70e3	51.83 51.83	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000008526 BRD1	Compare expression	[+]
Amniota	15 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	15 genes ENSG00000100425 BRD1 ENSMUSG00000022387 Brd1 ENSPTRG00000014521 BRD1 ENSMMUG00000000553 BRD1 ENSRNOG00000004538 Brd1 ENSBTAG00000046760 BRD1 ENSECAG00000020261 BRD1 ENSOCUG00000003432 BRD1 ENSCAFG00000000718 BRD1 ENSFCAG00000013151 BRD1 ENSCPOG00000005318 BRD1 ENSEEUG00000001462 BRD1 ENSMODG00000015772 BRD1 ENSOANG00000003992 BRD1 ENSGALG00000008526 BRD1	Compare expression	[+]
Tetrapoda	16 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000100425 BRD1 ENSMUSG00000022387 Brd1 ENSPTRG00000014521 BRD1 ENSMMUG00000000553 BRD1 ENSRNOG00000004538 Brd1 ENSBTAG00000046760 BRD1 ENSECAG00000020261 BRD1 ENSOCUG00000003432 BRD1 ENSCAFG00000000718 BRD1 ENSFCAG00000013151 BRD1 ENSCPOG00000005318 BRD1 ENSEEUG00000001462 BRD1 ENSMODG00000015772 BRD1 ENSOANG00000003992 BRD1 ENSGALG00000008526 BRD1 ENSXETG00000014519 brd1	Compare expression	[+]
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000100425 BRD1 ENSMUSG00000022387 Brd1 ENSDARG00000013596 brd1a ENSPTRG00000014521 BRD1 ENSMMUG00000000553 BRD1 ENSRNOG00000004538 Brd1 ENSBTAG00000046760 BRD1 ENSECAG00000020261 BRD1 ENSOCUG00000003432 BRD1 ENSCAFG00000000718 BRD1 ENSFCAG00000013151 BRD1 ENSCPOG00000005318 BRD1 ENSEEUG00000001462 BRD1 ENSMODG00000015772 BRD1 ENSOANG00000003992 BRD1 ENSGALG00000008526 BRD1 ENSXETG00000014519 brd1	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000009136.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	2 genes ENSACAG00000010035 BRPF1 ENSACAG00000016890 BRPF3	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000009136.

Cross-references

Ensembl	ENSACAG00000009136 (BRD1)
HGNC	HGNC:1102 (BRD1)
Uniprot/SPTREMBL	H9GEW9, H9GEW9_ANOCA