A. carolinensis Gene: UPF2 - ENSACAG00000009259 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009259
NameUPF2
DescriptionUPF2 regulator of nonsense transcripts homolog (yeast) [Source:HGNC Symbol;Acc:HGNC:17854]
OrganismAnolis carolinensis (green anole)
Synonym(s)dkfzp434d222, kiaa1408, rent2, smg-3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.63e3
  • 1.63e3
91.89
  • 91.89
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.25e3
  • 2.25e3
88.83
  • 88.83
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.58e3
  • 2.58e3
87.22
  • 87.22
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.72e3
  • 2.72e3
86.51
  • 86.51
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.03e3
  • 3.03e3
84.99
  • 84.99
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
3.09e3
  • 3.09e3
84.65
  • 84.65
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.12e3
  • 3.12e3
84.49
  • 84.49
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.43e3
  • 3.43e3
82.98
  • 82.98
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.72e3
  • 3.72e3
  • 4.62e3
81.55
  • 81.55
  • 77.08
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.93e3
  • 4.93e3
  • 6.51e3
75.52
  • 75.52
  • 67.66
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.18e3
  • 5.18e3
74.29
  • 74.29
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.83e3
  • 5.83e3
  • 6.72e3
71.05
  • 71.05
  • 66.65
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
7.56e3
  • 7.56e3
62.45
  • 62.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
7.65e3
  • 7.65e3
62.04
  • 62.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000009259 (UPF2)
HGNCHGNC:17854 (UPF2)
Uniprot/SPTREMBLH9GF04, H9GF04_ANOCA

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