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A. carolinensis Gene: TRUB1 - ENSACAG00000009282 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009282
NameTRUB1
DescriptionTruB pseudouridine (psi) synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
OrganismAnolis carolinensis (green anole)
Synonym(s)pus4
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.06e3
  • 8.06e3
59.98
  • 59.98
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.27e3
  • 8.27e3
58.96
  • 58.96
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
8.76e3
  • 8.76e3
56.51
  • 56.51
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.83e3
  • 8.83e3
56.14
  • 56.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.27e3
  • 9.27e3
53.96
  • 53.96
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
9.52e3
  • 9.52e3
52.75
  • 52.75
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
9.84e3
  • 9.84e3
51.14
  • 51.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.99e3
  • 9.99e3
50.39
  • 50.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.06e4
49.79
  • 49.79
  • 47.23
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.01e4
  • 1.01e4
  • 1.07e4
49.76
  • 49.76
  • 46.95
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
47.62
  • 47.62
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
  • 1.13e4
46.82
  • 46.82
  • 44.03
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.12e4
  • 1.12e4
44.57
  • 44.57
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
38.57
  • 38.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000009282.

Cross-references

EnsemblENSACAG00000009282 (TRUB1)
HGNCHGNC:16060 (TRUB1)
Uniprot/SPTREMBLH9GF07, H9GF07_ANOCA

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