A. carolinensis Gene: SMC1A - ENSACAG00000009404 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009404
NameSMC1A
Descriptionstructural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]
OrganismAnolis carolinensis (green anole)
Synonym(s)dxs423e, kiaa0178, sb1.8, smc1l1, smcb

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
268
  • 268
98.67
  • 98.67
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
270
  • 270
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
339
  • 339
98.32
  • 98.32
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
372
  • 372
98.16
  • 98.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.08e3
  • 2.08e3
89.69
  • 89.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.41e3
  • 2.41e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.42e3
  • 2.42e3
  • 2.61e3
87.97
  • 87.97
  • 87.04
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.37e3
  • 3.37e3
  • 4.96e3
83.26
  • 83.26
  • 75.40
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
3.57e3
  • 3.57e3
82.29
  • 82.29
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.61e3
  • 3.61e3
  • 3.83e3
82.08
  • 82.08
  • 80.98
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.97e3
  • 3.97e3
80.29
  • 80.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.26e3
  • 5.26e3
73.89
  • 73.89
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.46e3
  • 5.46e3
72.91
  • 72.91
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.93e3
  • 5.93e3
70.58
  • 70.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000009404 (SMC1A)
HGNCHGNC:11111 (SMC1A)
Uniprot/SPTREMBLG1KJ08, G1KJ08_ANOCA

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