A. carolinensis Gene: CTHRC1 - ENSACAG00000009420 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009420
NameCTHRC1
Descriptioncollagen triple helix repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:18831]
OrganismAnolis carolinensis (green anole)
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.11e3
  • 2.11e3
  • 4.43e3
89.52
  • 89.52
  • 78.03
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.15e3
  • 2.15e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.83e3
  • 2.83e3
85.95
  • 85.95
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.18e3
  • 3.18e3
84.21
  • 84.21
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.31e3
  • 3.31e3
83.56
  • 83.56
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.42e3
  • 8.42e3
  • 1.14e4
58.18
  • 58.18
  • 43.30
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.31e3
  • 9.31e3
  • 1.00e4
53.78
  • 53.78
  • 50.25
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.62e3
  • 9.62e3
52.26
  • 52.26
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.31e4
  • 1.31e4
34.92
  • 34.92
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.58e4
  • 1.58e4
21.62
  • 21.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000009420.

Cross-references

EnsemblENSACAG00000009420 (CTHRC1)
HGNCHGNC:18831 (CTHRC1)
Uniprot/SPTREMBLG1KIV3, G1KIV3_ANOCA

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