A. carolinensis Gene: LSM5 - ENSACAG00000009530 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009530
NameLSM5
DescriptionLSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17162]
OrganismAnolis carolinensis (green anole)
Synonym(s)yer146w

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000104life cycle
128
  • 128
99.37
  • 99.37
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
150
  • 150
99.26
  • 99.26
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
367
  • 367
  • 973
98.18
  • 98.18
  • 95.18
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
368
  • 368
98.18
  • 98.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
529
  • 529
  • 1.39e3
97.38
  • 97.38
  • 93.12
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
584
  • 584
  • 766
97.11
  • 97.11
  • 96.20
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
969
  • 969
95.19
  • 95.19
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
990
  • 990
95.09
  • 95.09
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.04e3
  • 1.04e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.75e3
  • 1.75e3
  • 3.09e3
91.31
  • 91.31
  • 84.68
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.32e3
  • 2.32e3
88.47
  • 88.47
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
7.91e3
  • 7.91e3
60.72
  • 60.72
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.02e4
  • 1.02e4
49.12
  • 49.12
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.26e4
  • 1.26e4
37.47
  • 37.47
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.28e4
  • 1.28e4
36.25
  • 36.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000009530 (LSM5)
HGNCHGNC:17162 (LSM5)
Uniprot/SPTREMBLH9GFA5, H9GFA5_ANOCA

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