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A. carolinensis Gene: PTCD2 - ENSACAG00000009747 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009747
NamePTCD2
Descriptionpentatricopeptide repeat domain 2 [Source:HGNC Symbol;Acc:HGNC:25734]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj12598
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.29e3
  • 1.29e3
  • 2.02e3
93.62
  • 93.62
  • 90.00
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.30e3
  • 1.30e3
  • 1.48e3
93.57
  • 93.57
  • 92.68
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.28e3
  • 2.28e3
88.69
  • 88.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.54e3
  • 2.54e3
87.39
  • 87.39
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.66e3
  • 2.66e3
86.80
  • 86.80
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.05e3
  • 3.05e3
  • 7.12e3
84.87
  • 84.87
  • 64.67
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.11e3
  • 3.11e3
84.57
  • 84.57
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
3.44e3
  • 3.44e3
  • 4.27e3
82.90
  • 82.90
  • 78.81
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.78e3
  • 3.78e3
81.22
  • 81.22
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.99e3
  • 4.99e3
75.24
  • 75.24
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
5.42e3
  • 5.42e3
73.07
  • 73.07
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.62e3
  • 5.62e3
72.12
  • 72.12
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.86e3
  • 5.86e3
70.90
  • 70.90
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.29e3
  • 7.29e3
63.80
  • 63.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species17 genesCompare expression

Orthology information comes from OMA : ENSACAG00000009747.

Cross-references

EnsemblENSACAG00000009747 (PTCD2)
HGNCHGNC:25734 (PTCD2)
Uniprot/SPTREMBLG1KJB5, G1KJB5_ANOCA

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