Gene: SLC6A11 - ENSACAG00000009875 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000009875
Name	SLC6A11
Description	solute carrier family 6 (neurotransmitter transporter), member 11 [Source:HGNC Symbol;Acc:HGNC:11044]
Organism	Anolis carolinensis (green anole)
Synonym(s)	gat3
Orthologs(s)	2 orthologs
Paralog(s)	16 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	657 657 5.70e3	96.74 96.74 71.71	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	793 793	96.07 96.07	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	5.73e3 5.73e3	71.53 71.53	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	6.65e3 6.65e3	66.99 66.99	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	9.62e3 9.62e3	52.25 52.25	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	9.84e3 9.84e3	51.15 51.15	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.04e4 1.04e4	48.45 48.45	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	1.25e4 1.25e4	37.91 37.91	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.32e4 1.32e4 1.35e4	34.51 34.51 33.17	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	1.38e4 1.38e4	31.68 31.68	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	1.39e4 1.39e4	30.96 30.96	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 1 stage UBERON:0000104life cycle	1.40e4 1.40e4	30.61 30.61	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	1.48e4 1.48e4	26.69 26.69	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000004879 SLC6A11	Compare expression	[+]
Euteleostomi	2 species Danio rerio (zebrafish) Gallus gallus (chicken)	2 genes ENSDARG00000087981 slc6a11b ENSGALG00000004879 SLC6A11	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000009875.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Deuterostomia	6 genes ENSACAG00000000035 SLC6A13 ENSACAG00000000036 ENSACAG00000010020 SLC6A1 ENSACAG00000013014 ENSACAG00000013426 SLC6A6 ENSACAG00000025590 SLC6A12	Compare expression	[+]
Bilateria	7 genes ENSACAG00000000035 SLC6A13 ENSACAG00000000036 ENSACAG00000008691 ENSACAG00000010020 SLC6A1 ENSACAG00000013014 ENSACAG00000013426 SLC6A6 ENSACAG00000025590 SLC6A12	Compare expression	[+]
Eukaryota	16 genes ENSACAG00000000035 SLC6A13 ENSACAG00000000036 ENSACAG00000001587 SLC6A19 ENSACAG00000003248 ENSACAG00000004828 SLC6A14 ENSACAG00000008691 ENSACAG00000010020 SLC6A1 ENSACAG00000010944 SLC6A15 ENSACAG00000011633 SLC6A4 ENSACAG00000013014 ENSACAG00000013426 SLC6A6 ENSACAG00000014213 SLC6A20 ENSACAG00000014488 SLC6A9 ENSACAG00000015182 SLC6A7 ENSACAG00000016675 SLC6A2 ENSACAG00000025590 SLC6A12	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000009875.

Cross-references

Ensembl	ENSACAG00000009875 (SLC6A11)
HGNC	HGNC:11044 (SLC6A11)
Uniprot/SPTREMBL	G1KJK5, G1KJK5_ANOCA