A. carolinensis Gene: RDH5 - ENSACAG00000009989 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000009989
NameRDH5
Descriptionretinol dehydrogenase 5 (11-cis/9-cis) [Source:HGNC Symbol;Acc:HGNC:9940]
OrganismAnolis carolinensis (green anole)
Synonym(s)hsd17b9, rdh1, sdr9c5

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.92e3
  • 1.92e3
90.49
  • 90.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
3.63e3
  • 3.63e3
82.01
  • 82.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.62e3
  • 9.62e3
  • 1.15e4
52.26
  • 52.26
  • 42.82
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.02e4
  • 1.02e4
  • 1.43e4
49.35
  • 49.35
  • 28.92
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
46.11
  • 46.11
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
43.91
  • 43.91
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.16e4
  • 1.16e4
  • 1.26e4
42.37
  • 42.37
  • 37.22
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
35.43
  • 35.43
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
28.28
  • 28.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000009989 (RDH5)
HGNCHGNC:9940 (RDH5)
Uniprot/SPTREMBLH9GFW1, H9GFW1_ANOCA

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