A. carolinensis Gene: SLC6A1 - ENSACAG00000010020 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000010020
NameSLC6A1
Descriptionsolute carrier family 6 (neurotransmitter transporter), member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
OrganismAnolis carolinensis (green anole)
Synonym(s)gabathg, gabatr, gat1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
247
  • 247
  • 9.87e3
98.78
  • 98.78
  • 50.98
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
797
  • 797
96.05
  • 96.05
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.99e3
  • 2.99e3
85.17
  • 85.17
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.97e3
  • 5.97e3
  • 8.15e3
70.37
  • 70.37
  • 59.53
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
34.79
  • 34.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
34.72
  • 34.72
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.42e4
  • 1.42e4
29.74
  • 29.74
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
  • 1.56e4
28.69
  • 28.69
  • 22.44
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000010020 (SLC6A1)
HGNCHGNC:11042 (SLC6A1)
Uniprot/SPTREMBLG1KJU7, G1KJU7_ANOCA

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