Gene: CYP27C1 - ENSACAG00000010044 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000010044
Name	CYP27C1
Description	cytochrome P450 family 27 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:33480]
Organism	Anolis carolinensis (green anole)
Synonym(s)	flj16008
Orthologs(s)	14 orthologs
Paralog(s)	27 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	4.12e3 4.12e3 7.48e3	79.57 79.57 62.86	AEIR AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	4.25e3 4.25e3	78.92 78.92	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	5.94e3 5.94e3	70.51 70.51	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	7.27e3 7.27e3	63.92 63.92	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	8.76e3 8.76e3	56.49 56.49	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	9.00e3 9.00e3	55.33 55.33	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	9.66e3 9.66e3	52.05 52.05	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	1.26e4 1.26e4	37.53 37.53	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000104life cycle	1.30e4 1.30e4	35.36 35.36	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.44e4 1.44e4 1.47e4	28.54 28.54 27.12	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000011532 CYP27C1	Compare expression	[+]
Amniota	12 species Homo sapiens (human) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken)	12 genes ENSG00000186684 CYP27C1 ENSPTRG00000012425 CYP27C1 ENSGGOG00000005813 CYP27C1 ENSMMUG00000015762 CYP27C1 ENSBTAG00000038275 CYP27C1 ENSECAG00000017379 CYP27C1 ENSOCUG00000009153 CYP27C1 ENSCAFG00000004542 CYP27C1 ENSFCAG00000013628 CYP27C1 ENSEEUG00000000439 CYP27C1 ENSMODG00000018698 CYP27C1 ENSGALG00000011532 CYP27C1	Compare expression	[+]
Tetrapoda	13 species Homo sapiens (human) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	13 genes ENSG00000186684 CYP27C1 ENSPTRG00000012425 CYP27C1 ENSGGOG00000005813 CYP27C1 ENSMMUG00000015762 CYP27C1 ENSBTAG00000038275 CYP27C1 ENSECAG00000017379 CYP27C1 ENSOCUG00000009153 CYP27C1 ENSCAFG00000004542 CYP27C1 ENSFCAG00000013628 CYP27C1 ENSEEUG00000000439 CYP27C1 ENSMODG00000018698 CYP27C1 ENSGALG00000011532 CYP27C1 ENSXETG00000025324 cyp27c1	Compare expression	[+]
Euteleostomi	14 species Homo sapiens (human) Danio rerio (zebrafish) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	14 genes ENSG00000186684 CYP27C1 ENSDARG00000092660 cyp27c1 ENSPTRG00000012425 CYP27C1 ENSGGOG00000005813 CYP27C1 ENSMMUG00000015762 CYP27C1 ENSBTAG00000038275 CYP27C1 ENSECAG00000017379 CYP27C1 ENSOCUG00000009153 CYP27C1 ENSCAFG00000004542 CYP27C1 ENSFCAG00000013628 CYP27C1 ENSEEUG00000000439 CYP27C1 ENSMODG00000018698 CYP27C1 ENSGALG00000011532 CYP27C1 ENSXETG00000025324 cyp27c1	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000010044.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Eukaryota	27 genes ENSACAG00000004353 ENSACAG00000005050 ENSACAG00000005055 ENSACAG00000006399 ENSACAG00000006644 ENSACAG00000006648 ENSACAG00000006878 CYP26C1 ENSACAG00000006907 CYP26A1 ENSACAG00000008999 ENSACAG00000009906 ENSACAG00000009958 ENSACAG00000010241 ENSACAG00000010244 ENSACAG00000010263 ENSACAG00000010281 ENSACAG00000010307 ENSACAG00000010564 ENSACAG00000011570 ENSACAG00000011823 ENSACAG00000012718 CYP27A1 ENSACAG00000013105 CYP27B1 ENSACAG00000013760 ENSACAG00000016341 ENSACAG00000022100 ENSACAG00000022942 ENSACAG00000024471 ENSACAG00000027810	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000010044.

Cross-references

Ensembl	ENSACAG00000010044 (CYP27C1)
HGNC	HGNC:33480 (CYP27C1)
Uniprot/SPTREMBL	H9GFY8, H9GFY8_ANOCA