A. carolinensis Gene: SDC1 - ENSACAG00000010489 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000010489
NameSDC1
Descriptionsyndecan 1 [Source:HGNC Symbol;Acc:HGNC:10658]
OrganismAnolis carolinensis (green anole)
Synonym(s)cd138, sdc, synd1, syndecan

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
337
  • 337
98.33
  • 98.33
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
434
  • 434
97.85
  • 97.85
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
441
  • 441
97.81
  • 97.81
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
558
  • 558
97.23
  • 97.23
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.03e3
  • 1.03e3
94.90
  • 94.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.50e3
  • 1.50e3
92.54
  • 92.54
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.59e3
  • 1.59e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.15e3
  • 3.15e3
84.38
  • 84.38
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.04e3
  • 4.04e3
  • 7.44e3
79.97
  • 79.97
  • 63.06
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
4.58e3
  • 4.58e3
77.28
  • 77.28
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.78e3
  • 5.78e3
71.29
  • 71.29
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.40e3
  • 7.40e3
  • 8.75e3
63.27
  • 63.27
  • 56.58
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.05e4
  • 1.05e4
  • 1.06e4
47.79
  • 47.79
  • 47.59
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.13e4
  • 1.13e4
43.82
  • 43.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000010489 (SDC1)
HGNCHGNC:10658 (SDC1)
Uniprot/SPTREMBLG1KK50, G1KK50_ANOCA

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