A. carolinensis Gene: TRAF1 - ENSACAG00000010515 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000010515
NameTRAF1
DescriptionTNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
OrganismAnolis carolinensis (green anole)
Synonym(s)ebi6

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
6.34e3
  • 6.34e3
68.54
  • 68.54
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
6.58e3
  • 6.58e3
  • 1.51e4
67.35
  • 67.35
  • 24.95
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
6.92e3
  • 6.92e3
65.64
  • 65.64
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.48e3
  • 7.48e3
62.85
  • 62.85
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.84e3
  • 7.84e3
61.07
  • 61.07
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
8.52e3
  • 8.52e3
  • 1.30e4
57.70
  • 57.70
  • 35.61
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
9.43e3
  • 9.43e3
53.20
  • 53.20
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.03e4
  • 1.03e4
49.05
  • 49.05
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.25e4
  • 1.25e4
38.09
  • 38.09
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
37.77
  • 37.77
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.26e4
  • 1.26e4
  • 1.46e4
37.59
  • 37.59
  • 27.34
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.31e4
  • 1.31e4
34.83
  • 34.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000010515 (TRAF1)
HGNCHGNC:12031 (TRAF1)
Uniprot/SPTREMBLH9GGH2, H9GGH2_ANOCA

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