A. carolinensis Gene: ABCF1 - ENSACAG00000010517 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000010517
NameABCF1
DescriptionATP binding cassette subfamily F member 1 [Source:HGNC Symbol;Acc:HGNC:70]
OrganismAnolis carolinensis (green anole)
Synonym(s)abc50, est123147

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
550
  • 550
  • 2.94e3
97.27
  • 97.27
  • 85.41
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
816
  • 816
95.95
  • 95.95
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.07e3
  • 1.07e3
94.68
  • 94.68
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.57e3
  • 1.57e3
92.20
  • 92.20
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.94e3
  • 1.94e3
  • 2.23e3
90.37
  • 90.37
  • 88.94
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.07e3
  • 2.07e3
89.72
  • 89.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
88.44
  • 88.44
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.34e3
  • 2.34e3
88.37
  • 88.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.35e3
  • 2.35e3
88.36
  • 88.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.35e3
  • 2.35e3
  • 2.84e3
88.33
  • 88.33
  • 85.92
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.46e3
  • 2.46e3
87.80
  • 87.80
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.64e3
  • 2.64e3
86.88
  • 86.88
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.85e3
  • 2.85e3
  • 3.55e3
85.86
  • 85.86
  • 82.39
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.34e3
  • 5.34e3
73.48
  • 73.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.68e3
  • 6.68e3
66.82
  • 66.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000010517 (ABCF1)
HGNCHGNC:70 (ABCF1)
Uniprot/SPTREMBLG1KKC5, G1KKC5_ANOCA

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