A. carolinensis Gene: HOXA1 - ENSACAG00000010967 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000010967
NameHOXA1
Descriptionhomeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
OrganismAnolis carolinensis (green anole)
Synonym(s)hox1, hox1f

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.00e3
  • 5.00e3
75.17
  • 75.17
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
5.62e3
  • 5.62e3
72.11
  • 72.11
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.09e4
  • 1.09e4
46.02
  • 46.02
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.18e4
  • 1.18e4
41.21
  • 41.21
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.45e4
  • 1.45e4
27.99
  • 27.99
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.53e4
  • 1.53e4
  • 1.80e4
24.19
  • 24.19
  • 10.58
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000010967 (HOXA1)
HGNCHGNC:5099 (HOXA1)
Uniprot/SPTREMBLH9GH18, H9GH18_ANOCA

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