Gene: CACNA1D - ENSACAG00000011075 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000011075
Name	CACNA1D
Description	calcium channel, voltage-dependent, L type, alpha 1D subunit [Source:HGNC Symbol;Acc:HGNC:1391]
Organism	Anolis carolinensis (green anole)
Synonym(s)	cach3, cacn4, cacnl1a2, cav1.3, cchl1a2
Orthologs(s)	1 orthologs
Paralog(s)	5 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	3.17e3 3.17e3	84.25 84.25	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	3.79e3 3.79e3 8.04e3	81.21 81.21 60.07	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	9.46e3 9.46e3 1.17e4	53.05 53.05 41.84	AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.23e4 1.23e4	38.96 38.96	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.26e4 1.26e4	37.46 37.46	AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage UBERON:0000104life cycle	1.29e4 1.29e4	35.87 35.87	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Bilateria	1 species Caenorhabditis elegans (nematode)	1 gene WBGene00001187 egl-19	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000011075.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	1 gene ENSACAG00000011077 CACNA1C	Compare expression	[+]
Deuterostomia	2 genes ENSACAG00000011077 CACNA1C ENSACAG00000012965 CACNA1F	Compare expression	[+]
Bilateria	3 genes ENSACAG00000009520 CACNA1S ENSACAG00000011077 CACNA1C ENSACAG00000012965 CACNA1F	Compare expression	[+]
Metazoa	5 genes ENSACAG00000000106 CACNA1E ENSACAG00000009520 CACNA1S ENSACAG00000011077 CACNA1C ENSACAG00000011575 CACNA1B ENSACAG00000012965 CACNA1F	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000011075.

Cross-references

Ensembl	ENSACAG00000011075 (CACNA1D)
HGNC	HGNC:1391 (CACNA1D)
Uniprot/SPTREMBL	G1KLA9, G1KLA9_ANOCA