Gene: CDH20 - ENSACAG00000011301
- Anolis carolinensis (green anole)
General information
| Ensembl ID | ENSACAG00000011301 |
|---|---|
| Name | CDH20 |
| Description | cadherin 20, type 2 [Source:HGNC Symbol;Acc:HGNC:1760] |
| Organism | Anolis carolinensis (green anole) |
| Synonym(s) | cdh7, cdh7l3 |
| Orthologs(s) | 18 orthologs |
| Paralog(s) | 7 paralogs |
Expression
| Anat. entity ID | Anatomical entity | Developmental stage(s) | Rank score | Expression score | Sources |
|---|---|---|---|---|---|
| UBERON:0000473 | testis |
| 3.16e3
| 84.30
| AEIR
|
| UBERON:0000955 | brain |
| 7.01e3
| 65.21
| AEIR
|
| UBERON:0005417 | forelimb bud |
| 8.44e3
| 58.12
| AEIR
|
| UBERON:0000992 | female gonad |
| 1.22e4
| 39.61
| AEIR
|
| UBERON:1000003 | dewlap |
| 1.24e4
| 38.51
| AEIR
|
| UBERON:0001134 | skeletal muscle tissue |
| 1.38e4
| 31.28
| AEIR
|
| A | Affymetrix |
|---|---|
| E | EST |
| I | In Situ |
| R | RNA-Seq |
| data |
| no data |
| 3.25e4 | lightgrey: low confidence scores |
|---|---|
| important score variation |
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.
Orthologs
Orthology information comes from OMA : ENSACAG00000011301.
Paralogs (same species)
| Taxon name | Gene(s) | Expression comparison | See details |
|---|---|---|---|
| Chordata | 7 genes
| Compare expression |
Paralogy information comes from OMA : ENSACAG00000011301.
Cross-references
| Ensembl | ENSACAG00000011301 (CDH20) |
|---|---|
| HGNC | HGNC:1760 (CDH20) |
| Uniprot/SPTREMBL | H9GHR6, H9GHR6_ANOCA |