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A. carolinensis Gene: PDZD4 - ENSACAG00000011417 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000011417
NamePDZD4
DescriptionPDZ domain containing 4 [Source:HGNC Symbol;Acc:HGNC:21167]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj34125, kiaa1444, lu1, pdzk4, pdzrn4l
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.59e3
  • 3.59e3
  • 7.91e3
82.19
  • 82.19
  • 60.74
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
3.94e3
  • 3.94e3
80.47
  • 80.47
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
7.28e3
  • 7.28e3
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.62e3
  • 7.62e3
62.18
  • 62.18
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
9.46e3
  • 9.46e3
53.04
  • 53.04
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
9.93e3
  • 9.93e3
50.68
  • 50.68
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
  • 1.33e4
35.25
  • 35.25
  • 33.94
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.44e4
  • 1.44e4
28.72
  • 28.72
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.47e4
  • 1.47e4
27.16
  • 27.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota15 species15 genesCompare expression
Tetrapoda16 species16 genesCompare expression
Euteleostomi17 species18 genesCompare expression

Orthology information comes from OMA : ENSACAG00000011417.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Deuterostomia2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000011417.

Cross-references

EnsemblENSACAG00000011417 (PDZD4)
HGNCHGNC:21167 (PDZD4)
Uniprot/SPTREMBLG1KL64, G1KL64_ANOCA

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