A. carolinensis Gene: ELFN1 - ENSACAG00000011549 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000011549
NameELFN1
Descriptionextracellular leucine-rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33154]
OrganismAnolis carolinensis (green anole)
Synonym(s)ppp1r28
Orthologs(s)11 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.85e3
  • 4.85e3
  • 9.14e3
75.94
  • 75.94
  • 54.62
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.87e3
  • 4.87e3
75.82
  • 75.82
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.40e3
  • 5.40e3
  • 7.38e3
73.18
  • 73.18
  • 63.35
AEIR
  • AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
6.72e3
  • 6.72e3
66.62
  • 66.62
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.69e3
  • 9.69e3
51.87
  • 51.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
9.70e3
  • 9.70e3
51.82
  • 51.82
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
9.79e3
  • 9.79e3
51.40
  • 51.40
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.06e4
  • 1.06e4
47.19
  • 47.19
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.10e4
  • 1.10e4
45.40
  • 45.40
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.22e4
  • 1.22e4
39.32
  • 39.32
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
37.80
  • 37.80
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.27e4
  • 1.27e4
36.87
  • 36.87
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.29e4
  • 1.29e4
  • 1.42e4
35.94
  • 35.94
  • 29.57
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.30e4
  • 1.30e4
35.25
  • 35.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota9 species9 genesCompare expression
Tetrapoda10 species10 genesCompare expression
Euteleostomi11 species11 genesCompare expression

Orthology information comes from OMA : ENSACAG00000011549.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000011549.

Cross-references

EnsemblENSACAG00000011549 (ELFN1)
HGNCHGNC:33154 (ELFN1)
Uniprot/SPTREMBLH9GTV0, H9GTV0_ANOCA

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