Gene: TRAF3IP2 - ENSACAG00000011569 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000011569
Name	TRAF3IP2
Description	TRAF3 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:1343]
Organism	Anolis carolinensis (green anole)
Synonym(s)	act1, c6orf2, c6orf4, c6orf5, c6orf6, ciks, dkfzp586g0522
Orthologs(s)	17 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	1.88e3 1.88e3	90.68 90.68	AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	3.01e3 3.01e3	85.07 85.07	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	3.12e3 3.12e3	84.49 84.49	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	3.50e3 3.50e3	82.61 82.61	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	3.56e3 3.56e3	82.33 82.33	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	3.76e3 3.76e3	81.35 81.35	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	4.13e3 4.13e3	79.49 79.49	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	4.68e3 4.68e3	76.77 76.77	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	5.05e3 5.05e3	74.92 74.92	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	5.38e3 5.38e3	73.28 73.28	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.16e3 7.16e3 7.19e3	64.44 64.44 64.29	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	7.80e3 7.80e3 1.21e4	61.28 61.28 39.81	AEIR AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	7.88e3 7.88e3 8.64e3	60.90 60.90 57.11	AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.75e3 8.75e3	56.56 56.56	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000015026 TRAF3IP2	Compare expression	[+]
Amniota	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	17 genes ENSG00000056972 TRAF3IP2 ENSMUSG00000019842 Traf3ip2 ENSPTRG00000018510 TRAF3IP2 ENSGGOG00000026037 TRAF3IP2 ENSMMUG00000002174 TRAF3IP2 ENSRNOG00000000595 Traf3ip2 ENSBTAG00000008600 TRAF3IP2 ENSSSCG00000004420 TRAF3IP2 ENSECAG00000000591 TRAF3IP2 ENSOCUG00000006179 TRAF3IP2 ENSCAFG00000003960 TRAF3IP2 ENSFCAG00000000667 TRAF3IP2 ENSCPOG00000012814 TRAF3IP2 ENSEEUG00000011726 TRAF3IP2 ENSMODG00000017907 TRAF3IP2 ENSOANG00000013378 TRAF3IP2 ENSGALG00000015026 TRAF3IP2	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000011569.

Cross-references

Ensembl	ENSACAG00000011569 (TRAF3IP2)
HGNC	HGNC:1343 (TRAF3IP2)
Uniprot/SPTREMBL	G1KLA4, G1KLA4_ANOCA