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A. carolinensis Gene: TMEM39B - ENSACAG00000011591 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000011591
NameTMEM39B
Descriptiontransmembrane protein 39B [Source:HGNC Symbol;Acc:HGNC:25510]
OrganismAnolis carolinensis (green anole)
Synonym(s)flj10315
Orthologs(s)25 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
596
  • 596
97.04
  • 97.04
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
995
  • 995
95.06
  • 95.06
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.35e3
  • 1.35e3
93.30
  • 93.30
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.37e3
  • 1.37e3
93.18
  • 93.18
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.26e3
  • 2.26e3
  • 5.03e3
88.78
  • 88.78
  • 75.02
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
2.33e3
  • 2.33e3
  • 4.90e3
88.44
  • 88.44
  • 75.70
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
3.30e3
  • 3.30e3
83.62
  • 83.62
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.91e3
  • 3.91e3
80.59
  • 80.59
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
4.18e3
  • 4.18e3
79.28
  • 79.28
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
4.35e3
  • 4.35e3
78.38
  • 78.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.36e3
  • 4.36e3
78.35
  • 78.35
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.70e3
  • 5.70e3
71.72
  • 71.72
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.16e3
  • 6.16e3
  • 8.03e3
69.40
  • 69.40
  • 60.15
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000011591.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSACAG00000011591.

Cross-references

EnsemblENSACAG00000011591 (TMEM39B)
HGNCHGNC:25510 (TMEM39B)
Uniprot/SPTREMBLH9GHY2, H9GHY2_ANOCA, R4GCT1, R4GCT1_ANOCA

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