A. carolinensis Gene: SLC6A4 - ENSACAG00000011633 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000011633
NameSLC6A4
Descriptionsolute carrier family 6 (neurotransmitter transporter), member 4 [Source:HGNC Symbol;Acc:HGNC:11050]
OrganismAnolis carolinensis (green anole)
Synonym(s)5-htt, htt, ocd1, sert1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.41e3
  • 4.41e3
  • 4.61e3
78.12
  • 78.12
  • 77.10
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.73e3
  • 5.73e3
71.54
  • 71.54
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
6.66e3
  • 6.66e3
66.93
  • 66.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.12e3
  • 7.12e3
  • 1.17e4
64.67
  • 64.67
  • 41.75
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.49e3
  • 7.49e3
62.80
  • 62.80
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
9.03e3
  • 9.03e3
55.18
  • 55.18
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
9.16e3
  • 9.16e3
54.51
  • 54.51
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
1.07e4
  • 1.07e4
46.81
  • 46.81
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
  • 1.29e4
38.32
  • 38.32
  • 36.02
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000011633 (SLC6A4)
HGNCHGNC:11050 (SLC6A4)
Uniprot/SPTREMBLH9GIA8, H9GIA8_ANOCA

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