A. carolinensis Gene: HDAC3 - ENSACAG00000011812 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000011812
NameHDAC3
Descriptionhistone deacetylase 3 [Source:HGNC Symbol;Acc:HGNC:4854]
OrganismAnolis carolinensis (green anole)
Synonym(s)hd3, rpd3, rpd3-2
Orthologs(s)23 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.98e3
  • 2.98e3
85.20
  • 85.20
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
3.17e3
  • 3.17e3
84.25
  • 84.25
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
4.29e3
  • 4.29e3
78.71
  • 78.71
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
4.34e3
  • 4.34e3
78.44
  • 78.44
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
4.92e3
  • 4.92e3
  • 5.18e3
75.60
  • 75.60
  • 74.27
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
5.32e3
  • 5.32e3
  • 7.93e3
73.60
  • 73.60
  • 60.61
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.47e3
  • 5.47e3
72.84
  • 72.84
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
5.48e3
  • 5.48e3
72.80
  • 72.80
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
5.54e3
  • 5.54e3
72.52
  • 72.52
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
5.61e3
  • 5.61e3
72.16
  • 72.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.87e3
  • 5.87e3
70.88
  • 70.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
5.89e3
  • 5.89e3
  • 6.43e3
70.78
  • 70.78
  • 68.08
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
6.64e3
  • 6.64e3
67.05
  • 67.05
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.35e3
  • 7.35e3
63.53
  • 63.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSACAG00000011812.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Opisthokonta2 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000011812.

Cross-references

EnsemblENSACAG00000011812 (HDAC3)
HGNCHGNC:4854 (HDAC3)
Uniprot/SPTREMBLG1KLP2, G1KLP2_ANOCA

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