A. carolinensis Gene: LIMCH1 - ENSACAG00000012067 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012067
NameLIMCH1
DescriptionLIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
OrganismAnolis carolinensis (green anole)
Synonym(s)dkfzp686a01247, limch1a, lmo7b
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.44e3
  • 1.44e3
  • 1.59e3
92.85
  • 92.85
  • 92.12
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.07e3
  • 2.07e3
89.71
  • 89.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.19e3
  • 2.19e3
89.15
  • 89.15
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
2.60e3
  • 2.60e3
87.08
  • 87.08
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.64e3
  • 2.64e3
86.91
  • 86.91
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.11e3
  • 3.11e3
  • 5.90e3
84.56
  • 84.56
  • 70.71
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
3.38e3
  • 3.38e3
83.23
  • 83.23
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
5.69e3
  • 5.69e3
71.73
  • 71.73
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
6.27e3
  • 6.27e3
  • 7.78e3
68.90
  • 68.90
  • 61.40
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.04e3
  • 8.04e3
60.09
  • 60.09
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
8.63e3
  • 8.63e3
57.18
  • 57.18
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
47.18
  • 47.18
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.07e4
  • 1.07e4
46.79
  • 46.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.35e4
  • 1.35e4
32.93
  • 32.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012067.

Cross-references

EnsemblENSACAG00000012067 (LIMCH1)
HGNCHGNC:29191 (LIMCH1)
Uniprot/SPTREMBLG1KXH7, G1KXH7_ANOCA

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