Gene: COL4A6 - ENSACAG00000012181 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000012181
Name	COL4A6
Description	collagen, type IV, alpha 6 [Source:HGNC Symbol;Acc:HGNC:2208]
Organism	Anolis carolinensis (green anole)

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000948	heart	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	4.39e3 4.39e3 5.49e3	78.19 78.19 72.75	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages UBERON:0000104life cycle UBERON:0000068embryo stage	4.39e3 4.39e3 1.38e4	78.19 78.19 31.46	AEIR AEIR AEIR
UBERON:0007144	embryonic post-anal tail	[+] 1 stage UBERON:0000068embryo stage	4.73e3 4.73e3	76.50 76.50	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	5.66e3 5.66e3	71.92 71.92	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	6.03e3 6.03e3	70.05 70.05	AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	6.49e3 6.49e3	67.78 67.78	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	7.14e3 7.14e3 9.74e3	64.57 64.57 51.65	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	8.45e3 8.45e3	58.04 58.04	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	8.76e3 8.76e3	56.53 56.53	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	8.76e3 8.76e3	56.51 56.51	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	9.12e3 9.12e3	54.72 54.72	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	1.03e4 1.03e4	48.80 48.80	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	1.42e4 1.42e4 1.51e4	29.36 29.36 25.09	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Cross-references

Ensembl	ENSACAG00000012181 (COL4A6)
HGNC	HGNC:2208 (COL4A6)
Uniprot/SPTREMBL	H9GIR1, H9GIR1_ANOCA