Gene: ALDH1A1 - ENSACAG00000012229 - Anolis carolinensis (green anole)

General information

Ensembl ID	ENSACAG00000012229
Name	ALDH1A1
Description	aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]
Organism	Anolis carolinensis (green anole)
Synonym(s)	aldh1, pumb1, raldh1
Orthologs(s)	24 orthologs
Paralog(s)	7 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000948	heart	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	1.16e3 1.16e3 1.31e3	94.23 94.23 93.52	AEIR AEIR AEIR
UBERON:0008812	hemipenis	[+] 1 stage UBERON:0000068embryo stage	1.27e3 1.27e3	93.68 93.68	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000113post-juvenile adult stage	1.31e3 1.31e3	93.48 93.48	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages UBERON:0000068embryo stage UBERON:0000104life cycle	1.95e3 1.95e3 6.65e3	90.32 90.32 66.98	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000104life cycle	2.88e3 2.88e3	85.71 85.71	AEIR AEIR
UBERON:0005417	forelimb bud	[+] 1 stage UBERON:0000068embryo stage	4.24e3 4.24e3	78.93 78.93	AEIR AEIR
UBERON:0002048	lung	[+] 1 stage UBERON:0000104life cycle	4.76e3 4.76e3	76.36 76.36	AEIR AEIR
UBERON:0005418	hindlimb bud	[+] 1 stage UBERON:0000068embryo stage	5.46e3 5.46e3	72.90 72.90	AEIR AEIR
UBERON:0001134	skeletal muscle tissue	[+] 2 stages UBERON:0000104life cycle UBERON:0000113post-juvenile adult stage	6.68e3 6.68e3 8.90e3	66.84 66.84 55.82	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 2 stages UBERON:0000113post-juvenile adult stage UBERON:0000104life cycle	6.95e3 6.95e3 1.16e4	65.50 65.50 42.25	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000104life cycle	7.68e3 7.68e3	61.88 61.88	AEIR AEIR
UBERON:1000003	dewlap	[+] 1 stage UBERON:0000104life cycle	8.04e3 8.04e3	60.06 60.06	AEIR AEIR
UBERON:0002369	adrenal gland	[+] 1 stage UBERON:0000104life cycle	1.00e4 1.00e4	50.27 50.27	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Sauria	1 species Gallus gallus (chicken)	1 gene ENSGALG00000015147 ALDH1A1	Compare expression	[+]
Amniota	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken)	23 genes ENSG00000165092 ALDH1A1 ENSMUSG00000024747 Aldh1a7 ENSMUSG00000053279 Aldh1a1 ENSPTRG00000021023 ALDH1A1 ENSGGOG00000008563 ALDH1A1 ENSMMUG00000013303 ALDH1A1 ENSRNOG00000017619 Aldh1a1 ENSBTAG00000008103 ALDH1A1 ENSSSCG00000028996 ALDH1A1 ENSECAG00000019343 ALDH1A1 ENSOCUG00000009444 ALDH1A1 ENSCAFG00000001791 ALDH1A1 ENSFCAG00000009133 ALDH1A1 ENSCPOG00000019352 ENSCPOG00000021204 ENSCPOG00000021303 ENSCPOG00000025696 ENSCPOG00000027235 ENSEEUG00000011760 ALDH1A1 ENSMODG00000002501 ENSMODG00000002554 ENSOANG00000013138 ALDH1A1 ENSGALG00000015147 ALDH1A1	Compare expression	[+]
Tetrapoda	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Xenopus tropicalis (western clawed frog)	24 genes ENSG00000165092 ALDH1A1 ENSMUSG00000024747 Aldh1a7 ENSMUSG00000053279 Aldh1a1 ENSPTRG00000021023 ALDH1A1 ENSGGOG00000008563 ALDH1A1 ENSMMUG00000013303 ALDH1A1 ENSRNOG00000017619 Aldh1a1 ENSBTAG00000008103 ALDH1A1 ENSSSCG00000028996 ALDH1A1 ENSECAG00000019343 ALDH1A1 ENSOCUG00000009444 ALDH1A1 ENSCAFG00000001791 ALDH1A1 ENSFCAG00000009133 ALDH1A1 ENSCPOG00000019352 ENSCPOG00000021204 ENSCPOG00000021303 ENSCPOG00000025696 ENSCPOG00000027235 ENSEEUG00000011760 ALDH1A1 ENSMODG00000002501 ENSMODG00000002554 ENSOANG00000013138 ALDH1A1 ENSGALG00000015147 ALDH1A1 ENSXETG00000019615 aldh1a1	Compare expression	[+]

Orthology information comes from OMA : ENSACAG00000012229.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Opisthokonta	6 genes ENSACAG00000002899 ALDH7A1 ENSACAG00000009091 ENSACAG00000009322 ALDH1A3 ENSACAG00000010204 ALDH8A1 ENSACAG00000013380 ALDH9A1 ENSACAG00000014641 ALDH1A2	Compare expression	[+]
Eukaryota	7 genes ENSACAG00000002616 ALDH5A1 ENSACAG00000002899 ALDH7A1 ENSACAG00000009091 ENSACAG00000009322 ALDH1A3 ENSACAG00000010204 ALDH8A1 ENSACAG00000013380 ALDH9A1 ENSACAG00000014641 ALDH1A2	Compare expression	[+]

Paralogy information comes from OMA : ENSACAG00000012229.

Cross-references

Ensembl	ENSACAG00000012229 (ALDH1A1)
HGNC	HGNC:402 (ALDH1A1)
Uniprot/SPTREMBL	G1KMC0, G1KMC0_ANOCA