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A. carolinensis Gene: SDC4 - ENSACAG00000012456 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012456
NameSDC4
Descriptionsyndecan 4 [Source:HGNC Symbol;Acc:HGNC:10661]
OrganismAnolis carolinensis (green anole)
Synonym(s)amphiglycan, ryudocan, synd4
Orthologs(s)15 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
508
  • 508
97.48
  • 97.48
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
769
  • 769
96.19
  • 96.19
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
1.23e3
  • 1.23e3
93.91
  • 93.91
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
1.47e3
  • 1.47e3
  • 2.72e3
92.73
  • 92.73
  • 86.52
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.96e3
  • 1.96e3
90.26
  • 90.26
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.03e3
  • 2.03e3
  • 2.46e3
89.91
  • 89.91
  • 87.77
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
2.15e3
  • 2.15e3
89.32
  • 89.32
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.34e3
  • 2.34e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.43e3
  • 2.43e3
  • 3.12e3
87.92
  • 87.92
  • 84.50
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.51e3
  • 2.51e3
  • 3.11e3
87.53
  • 87.53
  • 84.54
AEIR
  • AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
4.35e3
  • 4.35e3
78.41
  • 78.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.45e3
  • 4.45e3
77.91
  • 77.91
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
4.59e3
  • 4.59e3
77.22
  • 77.22
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
4.63e3
  • 4.63e3
77.04
  • 77.04
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.25e3
  • 8.25e3
59.05
  • 59.05
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota14 species14 genesCompare expression
Tetrapoda15 species15 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012456.

Cross-references

EnsemblENSACAG00000012456 (SDC4)
HGNCHGNC:10661 (SDC4)
Uniprot/SPTREMBLG1KMB2, G1KMB2_ANOCA

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