A. carolinensis Gene: HPCAL1 - ENSACAG00000012561 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012561
NameHPCAL1
Descriptionhippocalcin-like 1 [Source:HGNC Symbol;Acc:HGNC:5145]
OrganismAnolis carolinensis (green anole)
Synonym(s)bdr1, hlp2, vilip-3
Orthologs(s)23 orthologs
Paralog(s)23 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002048lung
  • UBERON:0000104life cycle
1.78e3
  • 1.78e3
91.16
  • 91.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.82e3
  • 1.82e3
  • 5.18e3
90.95
  • 90.95
  • 74.28
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
2.30e3
  • 2.30e3
88.57
  • 88.57
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
2.60e3
  • 2.60e3
87.09
  • 87.09
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
2.77e3
  • 2.77e3
86.26
  • 86.26
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
5.60e3
  • 5.60e3
72.19
  • 72.19
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.17e3
  • 6.17e3
  • 6.25e3
69.37
  • 69.37
  • 68.98
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
6.71e3
  • 6.71e3
  • 9.07e3
66.68
  • 66.68
  • 54.96
AEIR
  • AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
7.24e3
  • 7.24e3
64.06
  • 64.06
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.63e3
  • 7.63e3
62.13
  • 62.13
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
8.02e3
  • 8.02e3
60.18
  • 60.18
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.07e3
  • 8.07e3
  • 8.52e3
59.92
  • 59.92
  • 57.72
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
8.13e3
  • 8.13e3
59.62
  • 59.62
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
9.25e3
  • 9.25e3
54.07
  • 54.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.09e4
  • 1.09e4
45.77
  • 45.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012561.

Paralogs (same species)

Cross-references

EnsemblENSACAG00000012561 (HPCAL1)
HGNCHGNC:5145 (HPCAL1)
Uniprot/SPTREMBLG1KMH4, G1KMH4_ANOCA

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