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A. carolinensis Gene: NUP54 - ENSACAG00000012626 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012626
NameNUP54
Descriptionnucleoporin 54kDa [Source:HGNC Symbol;Acc:HGNC:17359]
OrganismAnolis carolinensis (green anole)
Orthologs(s)26 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
462
  • 462
97.71
  • 97.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
536
  • 536
97.34
  • 97.34
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
706
  • 706
96.50
  • 96.50
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
952
  • 952
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
2.17e3
  • 2.17e3
89.25
  • 89.25
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.31e3
  • 2.31e3
88.55
  • 88.55
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
3.54e3
  • 3.54e3
  • 4.15e3
82.45
  • 82.45
  • 79.40
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.43e3
  • 4.43e3
  • 5.20e3
78.01
  • 78.01
  • 74.17
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
4.47e3
  • 4.47e3
  • 5.42e3
77.84
  • 77.84
  • 73.11
AEIR
  • AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
4.62e3
  • 4.62e3
77.06
  • 77.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
4.98e3
  • 4.98e3
75.30
  • 75.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
5.09e3
  • 5.09e3
74.71
  • 74.71
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
5.81e3
  • 5.81e3
71.16
  • 71.16
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.86e3
  • 5.86e3
70.89
  • 70.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species17 genesCompare expression
Tetrapoda17 species18 genesCompare expression
Euteleostomi18 species19 genesCompare expression
Bilateria25 species26 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012626.

Cross-references

EnsemblENSACAG00000012626 (NUP54)
HGNCHGNC:17359 (NUP54)
Uniprot/SPTREMBLG1KMN5, G1KMN5_ANOCA

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