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A. carolinensis Gene: CHAF1B - ENSACAG00000012679 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012679
NameCHAF1B
Descriptionchromatin assembly factor 1 subunit B [Source:HGNC Symbol;Acc:HGNC:1911]
OrganismAnolis carolinensis (green anole)
Synonym(s)caf-1, caf1, caf1a, caf1p60, mphosph7, mpp7
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
798
  • 798
96.04
  • 96.04
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
858
  • 858
95.75
  • 95.75
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
1.27e3
  • 1.27e3
93.72
  • 93.72
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
1.37e3
  • 1.37e3
93.21
  • 93.21
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
2.43e3
  • 2.43e3
87.94
  • 87.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
3.27e3
  • 3.27e3
83.75
  • 83.75
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
6.47e3
  • 6.47e3
67.90
  • 67.90
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
7.02e3
  • 7.02e3
65.16
  • 65.16
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.13e4
  • 1.13e4
44.08
  • 44.08
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.21e4
  • 1.21e4
  • 1.45e4
39.84
  • 39.84
  • 27.87
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
  • 1.41e4
34.05
  • 34.05
  • 30.09
AEIR
  • AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
1.39e4
  • 1.39e4
  • 1.49e4
30.99
  • 30.99
  • 25.81
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
1.46e4
  • 1.46e4
27.57
  • 27.57
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012679.

Cross-references

EnsemblENSACAG00000012679 (CHAF1B)
HGNCHGNC:1911 (CHAF1B)
Uniprot/SPTREMBLG1KMQ3, G1KMQ3_ANOCA

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