A. carolinensis Gene: NIPA1 - ENSACAG00000012713 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012713
NameNIPA1
Descriptionnon imprinted in Prader-Willi/Angelman syndrome 1 [Source:HGNC Symbol;Acc:HGNC:17043]
OrganismAnolis carolinensis (green anole)
Synonym(s)mgc35570, spg6
Orthologs(s)15 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
3.24e3
  • 3.24e3
  • 8.80e3
83.91
  • 83.91
  • 56.33
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.52e3
  • 7.52e3
62.69
  • 62.69
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
8.50e3
  • 8.50e3
57.78
  • 57.78
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
9.20e3
  • 9.20e3
54.32
  • 54.32
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
9.39e3
  • 9.39e3
  • 1.33e4
53.37
  • 53.37
  • 33.87
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
9.60e3
  • 9.60e3
52.34
  • 52.34
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
46.35
  • 46.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.24e4
  • 1.24e4
38.67
  • 38.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
1.34e4
  • 1.34e4
  • 1.45e4
33.30
  • 33.30
  • 28.15
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Amniota14 species14 genesCompare expression
Euteleostomi15 species15 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012713.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSACAG00000012713.

Cross-references

EnsemblENSACAG00000012713 (NIPA1)
HGNCHGNC:17043 (NIPA1)
Uniprot/SPTREMBLG1KMN9, G1KMN9_ANOCA

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