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A. carolinensis Gene: RAD50 - ENSACAG00000012723 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012723
NameRAD50
DescriptionRAD50 homolog, double strand break repair protein [Source:HGNC Symbol;Acc:HGNC:9816]
OrganismAnolis carolinensis (green anole)
Synonym(s)hrad50, rad50-2
Orthologs(s)25 orthologs
Paralog(s)52 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
1.51e3
  • 1.51e3
92.48
  • 92.48
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
2.27e3
  • 2.27e3
88.71
  • 88.71
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
2.83e3
  • 2.83e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
2.92e3
  • 2.92e3
85.51
  • 85.51
AEIR
  • AEIR
UBERON:0002369adrenal gland
  • UBERON:0000104life cycle
4.75e3
  • 4.75e3
76.44
  • 76.44
AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
5.75e3
  • 5.75e3
71.47
  • 71.47
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.78e3
  • 6.78e3
  • 9.22e3
66.36
  • 66.36
  • 54.22
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
7.45e3
  • 7.45e3
63.00
  • 63.00
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
7.78e3
  • 7.78e3
61.40
  • 61.40
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
7.92e3
  • 7.92e3
  • 9.66e3
60.70
  • 60.70
  • 52.02
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
8.00e3
  • 8.00e3
60.28
  • 60.28
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
8.47e3
  • 8.47e3
  • 9.77e3
57.93
  • 57.93
  • 51.51
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
9.02e3
  • 9.02e3
55.22
  • 55.22
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.06e4
  • 1.06e4
47.32
  • 47.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota16 species16 genesCompare expression
Tetrapoda17 species17 genesCompare expression
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012723.

Paralogs (same species)

Cross-references

EnsemblENSACAG00000012723 (RAD50)
HGNCHGNC:9816 (RAD50)
Uniprot/SPTREMBLG1KMS1, G1KMS1_ANOCA

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