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A. carolinensis Gene: TUB - ENSACAG00000012730 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012730
NameTUB
Descriptiontubby bipartite transcription factor [Source:HGNC Symbol;Acc:HGNC:12406]
OrganismAnolis carolinensis (green anole)
Synonym(s)rd5
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
1.07e3
  • 1.07e3
94.71
  • 94.71
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.59e3
  • 2.59e3
  • 6.80e3
87.16
  • 87.16
  • 66.24
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.29e3
  • 3.29e3
83.68
  • 83.68
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.80e3
  • 3.80e3
  • 1.04e4
81.15
  • 81.15
  • 48.50
AEIR
  • AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.59e3
  • 5.59e3
72.27
  • 72.27
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
6.62e3
  • 6.62e3
67.12
  • 67.12
AEIR
  • AEIR
UBERON:0007144embryonic post-anal tail
  • UBERON:0000068embryo stage
6.86e3
  • 6.86e3
65.96
  • 65.96
AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
6.89e3
  • 6.89e3
65.81
  • 65.81
AEIR
  • AEIR
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
9.16e3
  • 9.16e3
54.55
  • 54.55
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.30e4
  • 1.30e4
35.38
  • 35.38
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
1.34e4
  • 1.34e4
33.33
  • 33.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.37e4
  • 1.37e4
31.79
  • 31.79
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.38e4
  • 1.38e4
31.27
  • 31.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Sauria1 species1 geneCompare expression
Amniota17 species17 genesCompare expression
Tetrapoda18 species18 genesCompare expression
Euteleostomi19 species19 genesCompare expression

Orthology information comes from OMA : ENSACAG00000012730.

Cross-references

EnsemblENSACAG00000012730 (TUB)
HGNCHGNC:12406 (TUB)
Uniprot/SPTREMBLH9GJ91, H9GJ91_ANOCA

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