A. carolinensis Gene: SOX6 - ENSACAG00000012782 - Anolis carolinensis (green anole)

General information

Ensembl IDENSACAG00000012782
NameSOX6
DescriptionSRY-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]
OrganismAnolis carolinensis (green anole)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001134skeletal muscle tissue
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
2.65e3
  • 2.65e3
  • 7.46e3
86.86
  • 86.86
  • 62.94
AEIR
  • AEIR
  • AEIR
UBERON:0002048lung
  • UBERON:0000104life cycle
3.49e3
  • 3.49e3
82.69
  • 82.69
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000113post-juvenile adult stage
4.88e3
  • 4.88e3
75.80
  • 75.80
AEIR
  • AEIR
UBERON:0005418hindlimb bud
  • UBERON:0000068embryo stage
5.62e3
  • 5.62e3
72.12
  • 72.12
AEIR
  • AEIR
UBERON:0005417forelimb bud
  • UBERON:0000068embryo stage
5.87e3
  • 5.87e3
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000104life cycle
  • UBERON:0000113post-juvenile adult stage
6.05e3
  • 6.05e3
  • 1.22e4
69.97
  • 69.97
  • 39.65
AEIR
  • AEIR
  • AEIR
UBERON:0008812hemipenis
  • UBERON:0000068embryo stage
7.78e3
  • 7.78e3
61.39
  • 61.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000113post-juvenile adult stage
  • UBERON:0000104life cycle
9.48e3
  • 9.48e3
  • 1.17e4
52.95
  • 52.95
  • 42.06
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000104life cycle
1.06e4
  • 1.06e4
47.27
  • 47.27
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000113post-juvenile adult stage
1.11e4
  • 1.11e4
44.66
  • 44.66
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
1.23e4
  • 1.23e4
38.76
  • 38.76
AEIR
  • AEIR
UBERON:1000003dewlap
  • UBERON:0000104life cycle
1.25e4
  • 1.25e4
38.07
  • 38.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSACAG00000012782 (SOX6)
HGNCHGNC:16421 (SOX6)
Uniprot/SPTREMBLG1KMW4, G1KMW4_ANOCA

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